Pedigree Analysis in Human Populations

incipient project with James Lee, History, Cal Tech

KIN: kinship coefficient (coancestry) (done)

gnome.agrenv.mcgill.ca/pub/genetics/software/KIN

http://gnome.agrenv.mcgill.ca/tinker/kin.htm

LINKAGE 5.2: general pedigrees

linkage.cpmc.columiba.edu/software/linkage

PAP: Pedigree Analysis Package (genotype probabilities)

ftp.genetics.utah.edu/pub/software/PAP

PedPack: Pedigree graphics; kinship coefficient (coancestry)?

evolution.genetics.washington.edu/pub/thompson/Pedpack

Pedraw: simple graphics and attributes (done)

ftp.gene.ucl.ac.uk/pub/packages/dcurtis

Vitesse: liklihood on pedigrees, kinship coefficient (coancestry)?

watson.hgen.pitt.edu [not avail yet]

MAPMAKER/QTL: genome linkage

ftp-genome.wi.mit.edu/distribution/software/newqtl and /mapmaker3

http://ftp-genome.wi.mit.edu/distribution/genome_software

Software and preprints available

linkage software list

KIN

MultiMap Home Page

Software written by Dave Curtis

FASTLINK Home Page

GAS2.0

LDB The GENETIC LOCATION DATABASE

Genome Center Information and Documentation

PHYLIP Home Page

The Human Genetic Analysis Resource

University of Michigan: Statistical Genetics Software